Intelligent Systems and Bioinformatics Laboratory

Current Research

Bioinformatics:

Functional analysis of high throughput gene expression experiments:

• Onto-Express collaboration with Stephen Krawetz (Version 1 paper) (Version 2 paper)

• Onto-Compare (paper)

• Onto-Design (paper)

• Onto-Translate (paper)

• Onto-Miner

• TAQ (paper)

Data Analysis Techniques for DNA and protein microarrays:

• Methods for the selection of differentially regulated genes  (paper)

• Protein chips for ovarian cancer screening and diagnosis with Michael Tainsky

• Gene expression changes in cell immortalization with Michael Tainsky (paper)

• Gene expression changes in epilepsy with Jeff Loeb

• Gene expression changes significance analysis with BioDiscovery (paper)

Image processing:

• Improved segmentation for real time fMRI with Stefan Posse

• Segmentation and visualization methods for PET images with Otto Muzik, PET Center

Neural networks:

• Applications of Kolmogorov's superposition theorem in neural networks with David Sprecher (paper)